Faculty

LIU Haiyan

Contact Information

Address: School of Life Sciences, University of Science and Technology of China, 230026 Hefei, P. R. China

Tel: 86-551-63607451

Fax: 86-551-63607451

E-mail: hyliu@ustc.edu.cn


Education and Research Experience

2001.01-present      Professor, School of Life Sciences, USTC

1985.09-1990.06     B.S, Department of Biology, USTC

1990.09-1996.01     Ph.D., University of Science and Technology of China

1993.11-1995.11       Visiting phD student in Laboratory of Physical Chemistry, ETH-Zurich

1996.01-1998.12      Lecturer, School of Life Sciences, USTC

1998.12-2000.12     Research Associate, Department of Chemistry, Duke University, with Professor Weitao Yang

1999.12-2000.12     Research Associate, Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, with Professor Jan Hermans

2000.12-2001.01      Visiting scholar, Laboratory of Physical Chemistry, ETH-Zurich

2001.08-2001.10      Visiting professor, Department of Chemistry, Duke University

2005.03-2005.08    Visiting professor, Laboratory of Physical Chemistry, ETH-Zurich


Research Interests

1. Methods and applications of computer simulation of biomolecular systems.

2. Methods and applications of protein design.


Representative Publications

1. Yufeng Liu, Sheng Wang, Jixin Dong, Linghui Chen, Xinyu Wang, Lei Wang, Fudong Li, Chenchen Wang, Jiahai Zhang, Yuzhu Wang, Si Wei, Quan Chen*, Haiyan Liu*De novo protein design with a denoising diffusion network independent of pre-trained structure prediction models Nature Methods, 2024, DOI: 10.1038/s41592-024-02437-w.

2. Xu, Yang; Hu, Xiuhon; Wang, Chenchen; Liu, Yongrui Liu; Chen, Quan*; Liu, Haiyan*; De novo Design of Cavity-containing Proteins with a Backbone-centred Neural Network Energy Function, Structure, 2024, 32(4), 424-432. DOI:10.1016/j.str.2024.01.006

3. Hu, Xiuhong; Xu, Yang; Wang, Chenchen; Liu, Yufeng Liu; Zhang, Lu; Zhang, Jiahai; Wang, Wenning*; Chen, Quan*; Liu, Haiyan*; Combined prediction and design reveals the target recognition mechanism of an intrinsically disordered protein interaction domain; Proc Natl Acad Sci USA, 2023;120:2305603120.

4. Liu, Yufeng; Zhang, Lu; Wang, Weilun; Zhu, Min; Wang, Chenchen; Li, Fudong;, Zhang, Jiahai; Li, Houqiang; Chen, Quan*; Liu, Haiyan*; Rotamer-free protein sequence design based on deep learning and self-consistency, Nature Computational Science, 2022,2, 451–462.

5. Huang, Bin; Xu. Yang; Hu,Xiuhon; Liu, Yongrui; Liao, Shanhui; Zhang, Jiahai; Huang, Chengdong; Hong, Jingjun; Chen, Quan*; Liu, Haiyan*; A backbone-centred energy function of neural networks for protein design; Nature, 2022, 602(7897):523-528.